PaySec + AdvancedMD: Eliminate Processing Fees on Patient Payments

Rachel D.2026-04-30

How medical practices using AdvancedMD are integrating PaySec's Network Offset Pricing to stop losing revenue to credit card processing fees on copays, patient balances, and self-pay collections.


AdvancedMD gives medical practices a comprehensive platform for EHR, practice management, billing, and patient engagement. But when it comes to collecting patient payments — copays at check-in, outstanding balances, and self-pay charges — credit card processing fees quietly erode your collections.

For a practice collecting $30,000-$100,000+ per month in patient payments, processing fees represent $10,000-$30,000+ annually. PaySec's integration with AdvancedMD eliminates that cost.

Patient Payment Processing Fees in Medical Practices

Practice SizeMonthly Patient PaymentsProcessing RateAnnual Cost
Solo provider$15,0002.7%$4,860
Small group (3-5 providers)$45,0002.5%$13,500
Mid-size group (6-15)$120,0002.4%$34,560
Large group (15+)$300,0002.3%$82,800

With rising high-deductible health plans (HDHPs), patient responsibility portions are increasing every year — making processing fees a growing expense.

How PaySec Integrates with AdvancedMD

Front Desk Collections (Copays)

  • Patient checks in and owes a copay
  • Front desk terminal displays dual pricing: cash/check price and card price
  • Patient chooses payment method
  • Payment posts to AdvancedMD patient account automatically
  • Example: $40 copay → $40 cash or $41.60 card

Patient Portal Payments

  • Patient receives statement or notification of balance due
  • AdvancedMD patient portal includes PaySec payment option
  • Portal displays: "Pay $250 by bank transfer or $260 by card"
  • Patient pays online at their convenience
  • Payment applies to account in AdvancedMD immediately

Self-Pay and Elective Services

For practices offering self-pay or elective procedures:

ServiceCash/Check PriceCard Price
Annual wellness (self-pay)$250$260
Cosmetic consultation$150$156
Weight loss program (monthly)$199$207

Payment Plans

For patients on payment plans through AdvancedMD:

  • Each installment processed with NOP
  • Patient informed of card pricing at plan setup
  • Automatic monthly billing with consistent pricing
  • ACH option available for lower installment amount

Healthcare-Specific Considerations

HIPAA Compliance

PaySec's integration maintains HIPAA compliance:

  • No PHI transmitted in payment processing
  • Payment data segregated from clinical records
  • BAA (Business Associate Agreement) available
  • Encrypted data transmission meets healthcare security standards

High-Deductible Plan Impact

With average deductibles exceeding $1,500 for individual plans and $3,000 for family plans:

Deductible CollectionPatients/MonthAvg AmountMonthly Fees Saved
Deductible payments50$200$270
Coinsurance100$75$203
Copays400$35$378
Monthly total$851
Annual savings$10,212

Patient Communication

Practices worried about patient reaction to dual pricing find:

  • Patients in healthcare are accustomed to different rates (insurance vs. self-pay, in-network vs. out-of-network)
  • Signage at check-in clearly explains both options
  • Most patients don't comment — they're focused on their health visit
  • Some patients switch to HSA debit cards (which process at lower interchange)

Practice Management Benefits

Revenue Cycle Impact

  • Collected revenue stays at 100% — no processing fee deduction
  • AR follow-up on patient balances becomes more profitable per dollar collected
  • Self-pay collections fully retained
  • Payment plan revenue fully captured

Staff Workflow

  • No change to check-in/checkout workflow
  • Terminal handles dual pricing display automatically
  • Reconciliation simplified (deposits = collections, no fee subtraction)
  • Front desk training takes 15 minutes

Technical Details

FeatureSpecification
AdvancedMD IntegrationPayment gateway API
TerminalPaySec NOP-enabled terminal
Patient PortalEmbedded payment page
PCI ComplianceLevel 1 (SAQ-A for portal, SAQ-B for terminal)
HIPAACompliant (BAA available)
Payment TypesCredit, debit, HSA/FSA, ACH
Recurring BillingSupported for payment plans
ReportingAdvancedMD + PaySec dashboard

Getting Started

  1. Contact PaySec for a healthcare merchant account
  2. Review integration points with your AdvancedMD configuration
  3. Install PaySec terminal(s) at front desk/checkout
  4. Configure patient portal payment page
  5. Train staff (15-minute overview)
  6. Go live — start keeping 100% of patient payments

PaySec + AdvancedMD: the practice management platform your staff loves, now with payment processing that doesn't take a cut of every patient payment.

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